IL_9OFV_102
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GGCU*GAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_102 not in the Motif Atlas
- Geometric match to IL_8CRE_111
- Geometric discrepancy: 0.1128
- The information below is about IL_8CRE_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9OFV|1|f|G|2823
9OFV|1|f|G|2824
9OFV|1|f|C|2825
9OFV|1|f|U|2826
*
9OFV|1|f|G|2863
9OFV|1|f|A|2864
9OFV|1|f|U|2865
9OFV|1|f|U|2866
9OFV|1|f|C|2867
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain O
- Large ribosomal subunit protein eL29
- Chain r
- Large ribosomal subunit protein uL16
- Chain x
- Transfer RNA; tRNA
Coloring options: