IL_9OJM_001

3D structure

PDB id

9OJM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial 28S PIC with tRNA and mtIF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AAG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OJM_001 not in the Motif Atlas

Geometric match to IL_9H3G_007

Geometric discrepancy: 0.1699

The information below is about IL_9H3G_007

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9OJM|1|5|A|4
9OJM|1|5|A|5
9OJM|1|5|G|6
*
9OJM|1|5|C|67
9OJM|1|5|G|68
9OJM|1|5|U|69

Current chains

Chain 5

RNA (71-MER)

Nearby chains

Chain 7

Translation initiation factor IF-2, mitochondrial