IL_9OJM_030
3D structure
- PDB id
- 9OJM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial 28S PIC with tRNA and mtIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GG*UAC
- Length
- 5 nucleotides
- Bulged bases
- 9OJM|1|A|A|1478
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OJM_030 not in the Motif Atlas
- Homologous match to IL_6CZR_147
- Geometric discrepancy: 0.1638
- The information below is about IL_6CZR_147
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
9OJM|1|A|G|1175
9OJM|1|A|G|1176
*
9OJM|1|A|U|1477
9OJM|1|A|A|1478
9OJM|1|A|C|1479
Current chains
- Chain A
- 12S mitochondrial RNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein mS38
- Chain D
- 28S ribosomal protein S5, mitochondrial
Coloring options: