IL_9OJM_036
3D structure
- PDB id
- 9OJM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial 28S PIC with tRNA and mtIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UAUAC*GUG
- Length
- 8 nucleotides
- Bulged bases
- 9OJM|1|A|U|1259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OJM_036 not in the Motif Atlas
- Homologous match to IL_6CZR_154
- Geometric discrepancy: 0.1617
- The information below is about IL_6CZR_154
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.4
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9OJM|1|A|U|1257
9OJM|1|A|A|1258
9OJM|1|A|U|1259
9OJM|1|A|A|1260
9OJM|1|A|C|1261
*
9OJM|1|A|G|1334
9OJM|1|A|U|1335
9OJM|1|A|G|1336
Current chains
- Chain A
- 12S mitochondrial RNA
Nearby chains
- Chain 7
- Translation initiation factor IF-2, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain H
- Small ribosomal subunit protein uS10m
- Chain K
- 28S ribosomal protein S14, mitochondrial
- Chain Z
- Small ribosomal subunit protein mS33
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