3D structure

PDB id
9OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Membrane-associated human mitoribosome in complex with TACO1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.46 Å

Loop

Sequence
CUAAG*CAAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9OLF_045 not in the Motif Atlas
Geometric match to IL_8GLP_204
Geometric discrepancy: 0.1861
The information below is about IL_8GLP_204
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_87767.2
Basepair signature
cWW-L-R-tSH-tHS-cWW
Number of instances in this motif group
17

Unit IDs

9OLF|1|A|C|2856
9OLF|1|A|U|2857
9OLF|1|A|A|2858
9OLF|1|A|A|2859
9OLF|1|A|G|2860
*
9OLF|1|A|C|2872
9OLF|1|A|A|2873
9OLF|1|A|A|2874
9OLF|1|A|A|2875
9OLF|1|A|G|2876

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain 6
39S ribosomal protein L38, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain p
Peptidyl-tRNA hydrolase ICT1, mitochondrial

Coloring options:


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