IL_9OV7_009

3D structure

PDB id

9OV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme sub-conformation 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.27 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OV7_009 not in the Motif Atlas

Geometric match to IL_7A0S_070

Geometric discrepancy: 0.3346

The information below is about IL_7A0S_070

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9OV7|1|A|C|347
9OV7|1|A|G|348
9OV7|1|A|G|349
9OV7|1|A|A|350
9OV7|1|A|G|351
*
9OV7|1|A|C|378
9OV7|1|A|G|379
9OV7|1|A|A|380
9OV7|1|A|A|381
9OV7|1|A|G|382

Current chains

Chain A

RNase P ribozyme

Nearby chains