IL_9OVB_001

3D structure

PDB id

9OVB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in 5 mM Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

9OVB|1|A|U|67

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OVB_001 not in the Motif Atlas

Geometric match to IL_9AXU_122

Geometric discrepancy: 0.3411

The information below is about IL_9AXU_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

173

Unit IDs

9OVB|1|A|G|66
9OVB|1|A|U|67
9OVB|1|A|G|68
*
9OVB|1|A|C|77
9OVB|1|A|C|78

Current chains

Chain A

RNase P RNA component

Nearby chains