IL_9OWK_010

3D structure

PDB id

9OWK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 10 mM Ca2+

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OWK_010 not in the Motif Atlas

Geometric match to IL_8B0X_153

Geometric discrepancy: 0.3055

The information below is about IL_8B0X_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.4

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

19

Unit IDs

9OWK|1|A|C|347
9OWK|1|A|G|348
9OWK|1|A|G|349
9OWK|1|A|A|350
9OWK|1|A|G|351
*
9OWK|1|A|C|378
9OWK|1|A|G|379
9OWK|1|A|A|380
9OWK|1|A|A|381
9OWK|1|A|G|382

Current chains

Chain A

RNase P RNA component

Nearby chains