IL_9OY2_007

3D structure

PDB id

9OY2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

CAGU*ACG

Length

7 nucleotides

Bulged bases

9OY2|1|A|G|198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OY2_007 not in the Motif Atlas

Geometric match to IL_9TM6_001

Geometric discrepancy: 0.306

The information below is about IL_9TM6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9OY2|1|A|C|196
9OY2|1|A|A|197
9OY2|1|A|G|198
9OY2|1|A|U|199
*
9OY2|1|A|A|232
9OY2|1|A|C|233
9OY2|1|A|G|234

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains