IL_9OY3_006

3D structure

PDB id

9OY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CAC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OY3_006 not in the Motif Atlas

Geometric match to IL_5UNE_006

Geometric discrepancy: 0.3515

The information below is about IL_5UNE_006

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_27134.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

6

Unit IDs

9OY3|1|A|C|194
9OY3|1|A|A|195
9OY3|1|A|C|196
*
9OY3|1|A|G|234
9OY3|1|A|C|235
9OY3|1|A|G|236

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains