IL_9OY3_010

3D structure

PDB id

9OY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P ribozyme tetraloop mutant (sub-conformation 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGG*CGAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9OY3_010 not in the Motif Atlas

Geometric match to IL_9NLN_006

Geometric discrepancy: 0.3869

The information below is about IL_9NLN_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24466.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

9

Unit IDs

9OY3|1|A|C|347
9OY3|1|A|G|348
9OY3|1|A|G|349
*
9OY3|1|A|C|378
9OY3|1|A|G|379
9OY3|1|A|A|380
9OY3|1|A|A|381
9OY3|1|A|G|382

Current chains

Chain A

RNase P RNA component tetraloop mutant

Nearby chains