3D structure

PDB id
9P76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human eEF1A-A/T-P state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CUCAGUAC*GGAACCG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P76|1|L5|C|4596
9P76|1|L5|U|4597
9P76|1|L5|C|4598
9P76|1|L5|A|4599
9P76|1|L5|G|4600
9P76|1|L5|U|4601
9P76|1|L5|A|4602
9P76|1|L5|C|4603
*
9P76|1|L5|G|4608
9P76|1|L5|G|4609
9P76|1|L5|A|4610
9P76|1|L5|A|4611
9P76|1|L5|C|4612
9P76|1|L5|C|4613
9P76|1|L5|G|4614

Current chains

Chain L5
28S rRNA

Nearby chains

Chain AT
Transfer RNA; tRNA
Chain CF
Elongation factor 1-alpha 1
Chain LB
Large ribosomal subunit protein uL3
Chain LH
60S ribosomal protein L9
Chain LV
60S ribosomal protein L23
Chain Lm
Large ribosomal subunit protein eL40

Coloring options:

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