IL_9P78_228

3D structure

PDB id

9P78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAU*AGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P78|1|S2|G|942
9P78|1|S2|U|943
9P78|1|S2|A|944
9P78|1|S2|U|945
*
9P78|1|S2|A|981
9P78|1|S2|G|982
9P78|1|S2|A|983
9P78|1|S2|C|984

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain SB

40S ribosomal protein S3a

Chain SO

Small ribosomal subunit protein uS11

Chain Sa

40S ribosomal protein S26