IL_9P7C_104

3D structure

PDB id

9P7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class3 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGAAGUCGG*CUGU(OMC)

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7C|1|L5|G|2847
9P7C|1|L5|G|2848
9P7C|1|L5|A|2849
9P7C|1|L5|A|2850
9P7C|1|L5|G|2851
9P7C|1|L5|U|2852
9P7C|1|L5|C|2853
9P7C|1|L5|G|2854
9P7C|1|L5|G|2855
*
9P7C|1|L5|C|3837
9P7C|1|L5|U|3838
9P7C|1|L5|G|3839
9P7C|1|L5|U|3840
9P7C|1|L5|OMC|3841

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23