IL_9P7E_145

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CCAU*AGGCG

Length

9 nucleotides

Bulged bases

9P7E|1|L5|C|4720

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|L5|C|4582
9P7E|1|L5|C|4583
9P7E|1|L5|A|4584
9P7E|1|L5|U|4585
*
9P7E|1|L5|A|4717
9P7E|1|L5|G|4718
9P7E|1|L5|G|4719
9P7E|1|L5|C|4720
9P7E|1|L5|G|4721

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LO

60S ribosomal protein L13a