IL_9P7F_066

3D structure

PDB id

9P7F (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

CUCGCAGACCCGAGCCACG*CG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7F|1|L5|C|1694
9P7F|1|L5|U|1695
9P7F|1|L5|C|1696
9P7F|1|L5|G|1697
9P7F|1|L5|C|1698
9P7F|1|L5|A|1699
9P7F|1|L5|G|1700
9P7F|1|L5|A|1701
9P7F|1|L5|C|1702
9P7F|1|L5|C|1703
9P7F|1|L5|C|1704
9P7F|1|L5|G|1705
9P7F|1|L5|A|1706
9P7F|1|L5|G|1716
9P7F|1|L5|C|1717
9P7F|1|L5|C|1718
9P7F|1|L5|A|1719
9P7F|1|L5|C|1720
9P7F|1|L5|G|1721
*
9P7F|1|L5|C|1841
9P7F|1|L5|G|1842

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

Large ribosomal subunit protein eL29