IL_9P7G_023

3D structure

PDB id

9P7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9P7G|1|L5|C|685, 9P7G|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7G|1|L5|A|466
9P7G|1|L5|U|467
9P7G|1|L5|U|468
9P7G|1|L5|C|469
9P7G|1|L5|A|470
9P7G|1|L5|A|471
9P7G|1|L5|C|472
*
9P7G|1|L5|G|682
9P7G|1|L5|C|683
9P7G|1|L5|G|684
9P7G|1|L5|C|685
9P7G|1|L5|A|686
9P7G|1|L5|U|687
9P7G|1|L5|U|688
9P7G|1|L5|U|689

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28