IL_9P7H_144

3D structure

PDB id

9P7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GAU*ACC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9P7H_144 not in the Motif Atlas

Homologous match to IL_8GLP_152

Geometric discrepancy: 0.0852

The information below is about IL_8GLP_152

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

240

Unit IDs

9P7H|1|L5|G|4495
9P7H|1|L5|A|4496
9P7H|1|L5|U|4497
*
9P7H|1|L5|A|4503
9P7H|1|L5|C|4504
9P7H|1|L5|C|4505

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23