IL_9P7H_208

3D structure

PDB id

9P7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GAC*GGC

Length

6 nucleotides

Bulged bases

9P7H|1|S2|A|536

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9P7H_208 not in the Motif Atlas

Geometric match to IL_4LFB_007

Geometric discrepancy: 0.2569

The information below is about IL_4LFB_007

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_92286.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

6

Unit IDs

9P7H|1|S2|G|535
9P7H|1|S2|A|536
9P7H|1|S2|C|537
*
9P7H|1|S2|G|546
9P7H|1|S2|G|547
9P7H|1|S2|C|548

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain Se

Small ribosomal subunit protein eS30