IL_9P7J_026
3D structure
- PDB id
- 9P7J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.91 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7J_026 not in the Motif Atlas
- Geometric match to IL_4V9F_075
- Geometric discrepancy: 0.2618
- The information below is about IL_4V9F_075
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_37129.1
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 57
Unit IDs
9P7J|1|L5|G|497
9P7J|1|L5|C|498
9P7J|1|L5|G|499
*
9P7J|1|L5|C|656
9P7J|1|L5|C|657
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain LC
- 60S ribosomal protein L4
Coloring options: