3D structure

PDB id
9P7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human Post-eEF1A-AT-P state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.92 Å

Loop

Sequence
UGGAAUG*CGAGAGA
Length
14 nucleotides
Bulged bases
9P7L|1|L5|U|2661, 9P7L|1|L5|A|2674
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P7L|1|L5|U|2656
9P7L|1|L5|G|2657
9P7L|1|L5|G|2658
9P7L|1|L5|A|2659
9P7L|1|L5|A|2660
9P7L|1|L5|U|2661
9P7L|1|L5|G|2662
*
9P7L|1|L5|C|2672
9P7L|1|L5|G|2673
9P7L|1|L5|A|2674
9P7L|1|L5|G|2675
9P7L|1|L5|A|2676
9P7L|1|L5|G|2677
9P7L|1|L5|A|2678

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19
Chain LZ
60S ribosomal protein L27
Chain Lc
60S ribosomal protein L30
Chain Lp
60S ribosomal protein L37a
Chain SN
40S ribosomal protein S13

Coloring options:

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