IL_9P7W_189

3D structure

PDB id

9P7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9P7W|1|S2|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7W|1|S2|G|145
9P7W|1|S2|G|146
9P7W|1|S2|A|147
9P7W|1|S2|U|148
9P7W|1|S2|A|149
9P7W|1|S2|A|150
9P7W|1|S2|C|151
*
9P7W|1|S2|G|167
9P7W|1|S2|C|168
9P7W|1|S2|U|169
9P7W|1|S2|A|170
9P7W|1|S2|A|171
9P7W|1|S2|OMU|172
9P7W|1|S2|A|173
9P7W|1|S2|OMC|174

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24