IL_9P7W_210
3D structure
- PDB id
- 9P7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AG(OMG)GCAAG*CU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7W_210 not in the Motif Atlas
- Homologous match to IL_9H3G_185
- Geometric discrepancy: 0.1184
- The information below is about IL_9H3G_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 14
Unit IDs
9P7W|1|S2|A|599
9P7W|1|S2|G|600
9P7W|1|S2|OMG|601
9P7W|1|S2|G|602
9P7W|1|S2|C|603
9P7W|1|S2|A|604
9P7W|1|S2|A|605
9P7W|1|S2|G|606
*
9P7W|1|S2|C|636
9P7W|1|S2|U|637
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SJ
- 40S ribosomal protein S9
- Chain Se
- Small ribosomal subunit protein eS30
Coloring options: