IL_9P7W_237
3D structure
- PDB id
- 9P7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9P7W|1|S2|C|1215, 9P7W|1|S2|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9P7W_237 not in the Motif Atlas
- Homologous match to IL_9H3G_212
- Geometric discrepancy: 0.1636
- The information below is about IL_9H3G_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.15
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 24
Unit IDs
9P7W|1|S2|A|1214
9P7W|1|S2|C|1215
9P7W|1|S2|C|1216
9P7W|1|S2|A|1217
*
9P7W|1|S2|U|1681
9P7W|1|S2|C|1682
9P7W|1|S2|C|1683
9P7W|1|S2|C|1684
9P7W|1|S2|U|1685
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain Pt
- Transfer RNA; tRNA
- Chain SF
- 40S ribosomal protein S5
- Chain SQ
- Small ribosomal subunit protein uS9
- Chain SU
- 40S ribosomal protein S20
- Chain Sc
- 40S ribosomal protein S28
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