IL_9P8C_022

3D structure

PDB id

9P8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 (rotate3) without E tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9P8C|1|L5|U|467, 9P8C|1|L5|C|685, 9P8C|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8C|1|L5|A|466
9P8C|1|L5|U|467
9P8C|1|L5|U|468
9P8C|1|L5|C|469
9P8C|1|L5|A|470
9P8C|1|L5|A|471
9P8C|1|L5|C|472
*
9P8C|1|L5|G|682
9P8C|1|L5|C|683
9P8C|1|L5|G|684
9P8C|1|L5|C|685
9P8C|1|L5|A|686
9P8C|1|L5|U|687
9P8C|1|L5|U|688
9P8C|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28