IL_9P8I_063

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

CGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|L5|C|1551
9P8I|1|L5|G|1552
9P8I|1|L5|A|1553
9P8I|1|L5|A|1554
9P8I|1|L5|G|1555
*
9P8I|1|L5|U|1572
9P8I|1|L5|G|1573
9P8I|1|L5|G|1574
9P8I|1|L5|A|1575
9P8I|1|L5|G|1576

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LR

60S ribosomal protein L19

Chain Lp

60S ribosomal protein L37a