IL_9P8I_071
3D structure
- PDB id
- 9P8I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ HHT and CHX treated human P-Z state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.89 Å
Loop
- Sequence
- CGGUAAA*UU(PSU)AAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P8I|1|L5|C|1732
9P8I|1|L5|G|1733
9P8I|1|L5|G|1734
9P8I|1|L5|U|1735
9P8I|1|L5|A|1736
9P8I|1|L5|A|1737
9P8I|1|L5|A|1738
*
9P8I|1|L5|U|1790
9P8I|1|L5|U|1791
9P8I|1|L5|PSU|1792
9P8I|1|L5|A|1793
9P8I|1|L5|A|1794
9P8I|1|L5|A|1795
9P8I|1|L5|U|1796
9P8I|1|L5|G|1797
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- Large ribosomal subunit protein uL18
- Chain LF
- 60S ribosomal protein L7
- Chain LI
- Ribosomal protein uL16-like
- Chain LS
- 60S ribosomal protein L18a
- Chain LT
- 60S ribosomal protein L21
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