IL_9P8I_232

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

CGGGG*CAAG

Length

9 nucleotides

Bulged bases

9P8I|1|S2|G|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|S2|C|931
9P8I|1|S2|G|932
9P8I|1|S2|G|933
9P8I|1|S2|G|934
9P8I|1|S2|G|935
*
9P8I|1|S2|C|1007
9P8I|1|S2|A|1008
9P8I|1|S2|A|1009
9P8I|1|S2|G|1010

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain Lc

60S ribosomal protein L30

Chain SB

40S ribosomal protein S3a

Chain SN

40S ribosomal protein S13

Chain Sa

40S ribosomal protein S26