IL_9P9I_199

3D structure

PDB id

9P9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9P9I|1|S2|U|361, 9P9I|1|S2|C|399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9I|1|S2|U|359
9P9I|1|S2|A|360
9P9I|1|S2|U|361
9P9I|1|S2|C|362
9P9I|1|S2|A|363
9P9I|1|S2|A|364
*
9P9I|1|S2|U|396
9P9I|1|S2|G|397
9P9I|1|S2|A|398
9P9I|1|S2|C|399
9P9I|1|S2|C|400
9P9I|1|S2|A|401
9P9I|1|S2|C|402
9P9I|1|S2|G|403

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11

Chain SX

40S ribosomal protein S23