IL_9P9I_210

3D structure

PDB id

9P9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GAG*CGAGGAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9I|1|S2|G|563
9P9I|1|S2|A|564
9P9I|1|S2|G|565
*
9P9I|1|S2|C|585
9P9I|1|S2|G|586
9P9I|1|S2|A|587
9P9I|1|S2|G|588
9P9I|1|S2|G|589
9P9I|1|S2|A|590
9P9I|1|S2|U|591
9P9I|1|S2|C|592

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

Small ribosomal subunit protein eS30