3D structure

PDB id
9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
C. acnes 70S ribosome bound to Doxycycline
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UGUAAUC*GCGUG
Length
12 nucleotides
Bulged bases
9PJ7|1|A|U|614
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PJ7|1|A|U|587
9PJ7|1|A|G|588
9PJ7|1|A|U|589
9PJ7|1|A|A|590
9PJ7|1|A|A|591
9PJ7|1|A|U|592
9PJ7|1|A|C|593
*
9PJ7|1|A|G|611
9PJ7|1|A|C|612
9PJ7|1|A|G|613
9PJ7|1|A|U|614
9PJ7|1|A|G|615

Current chains

Chain A
16S rRNA

Nearby chains

Chain H
30S ribosomal protein S8
Chain P
30S ribosomal protein S16
Chain Q
30S ribosomal protein S17

Coloring options:

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