IL_9PJ7_067

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAAC*GGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9PJ7_067 not in the Motif Atlas

Geometric match to IL_8B0X_064

Geometric discrepancy: 0.2024

The information below is about IL_8B0X_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05502.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

9PJ7|1|A|U|1432
9PJ7|1|A|A|1433
9PJ7|1|A|A|1434
9PJ7|1|A|C|1435
*
9PJ7|1|A|G|1442
9PJ7|1|A|G|1443
9PJ7|1|A|G|1444

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20