IL_9PJ8_106
3D structure
- PDB id
- 9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Sarecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9PJ8|1|a|A|1240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ8_106 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.0829
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 25
Unit IDs
9PJ8|1|a|C|1081
9PJ8|1|a|U|1082
9PJ8|1|a|A|1083
9PJ8|1|a|A|1084
9PJ8|1|a|G|1085
*
9PJ8|1|a|C|1237
9PJ8|1|a|G|1238
9PJ8|1|a|A|1239
9PJ8|1|a|A|1240
9PJ8|1|a|G|1241
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain V
- 50S ribosomal protein bL37
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain p
- 50S ribosomal protein L20
- Chain q
- Large ribosomal subunit protein bL21
- Chain y
- 50S ribosomal protein L30
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