IL_9PJ8_123

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGUC*GCGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9PJ8_123 not in the Motif Atlas

Geometric match to IL_8BH9_001

Geometric discrepancy: 0.3195

The information below is about IL_8BH9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65740.2

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

4

Unit IDs

9PJ8|1|a|U|1486
9PJ8|1|a|G|1487
9PJ8|1|a|U|1488
9PJ8|1|a|C|1489
*
9PJ8|1|a|G|1773
9PJ8|1|a|C|1774
9PJ8|1|a|G|1775
9PJ8|1|a|G|1776

Current chains

Chain a

23S rRNA

Nearby chains