IL_9PJ9_052
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CCGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ9_052 not in the Motif Atlas
- Geometric match to IL_8B0X_052
- Geometric discrepancy: 0.1896
- The information below is about IL_8B0X_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.2
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
9PJ9|1|A|C|1144
9PJ9|1|A|C|1145
9PJ9|1|A|G|1146
9PJ9|1|A|C|1147
*
9PJ9|1|A|G|1161
9PJ9|1|A|A|1162
9PJ9|1|A|G|1163
9PJ9|1|A|G|1164
9PJ9|1|A|A|1165
9PJ9|1|A|A|1166
9PJ9|1|A|G|1167
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain J
- 30S ribosomal protein S9
Coloring options: