IL_9PJ9_177
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GACG*CUGAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PJ9_177 not in the Motif Atlas
- Geometric match to IL_9DFE_108
- Geometric discrepancy: 0.2151
- The information below is about IL_9DFE_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34942.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9PJ9|1|a|G|3023
9PJ9|1|a|A|3024
9PJ9|1|a|C|3025
9PJ9|1|a|G|3026
*
9PJ9|1|a|C|3050
9PJ9|1|a|U|3051
9PJ9|1|a|G|3052
9PJ9|1|a|A|3053
9PJ9|1|a|C|3054
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain m
- Large ribosomal subunit protein bL17
- Chain o
- 50S ribosomal protein L19
Coloring options: