IL_9PKD_067
3D structure
- PDB id
- 9PKD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ CHX and HHT treated 80S consensus ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CUCGCAGACCCGAGCCACG*CG
- Length
- 21 nucleotides
- Bulged bases
- 9PKD|1|L5|A|1701
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PKD|1|L5|C|1694
9PKD|1|L5|U|1695
9PKD|1|L5|C|1696
9PKD|1|L5|G|1697
9PKD|1|L5|C|1698
9PKD|1|L5|A|1699
9PKD|1|L5|G|1700
9PKD|1|L5|A|1701
9PKD|1|L5|C|1702
9PKD|1|L5|C|1703
9PKD|1|L5|C|1704
9PKD|1|L5|G|1705
9PKD|1|L5|A|1706
9PKD|1|L5|G|1716
9PKD|1|L5|C|1717
9PKD|1|L5|C|1718
9PKD|1|L5|A|1719
9PKD|1|L5|C|1720
9PKD|1|L5|G|1721
*
9PKD|1|L5|C|1841
9PKD|1|L5|G|1842
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- Large ribosomal subunit protein eL29
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