IL_9PKD_194
3D structure
- PDB id
- 9PKD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ CHX and HHT treated 80S consensus ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GGAUAAC*GCUAA(OMU)A(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 9PKD|1|S2|OMU|172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PKD|1|S2|G|145
9PKD|1|S2|G|146
9PKD|1|S2|A|147
9PKD|1|S2|U|148
9PKD|1|S2|A|149
9PKD|1|S2|A|150
9PKD|1|S2|C|151
*
9PKD|1|S2|G|167
9PKD|1|S2|C|168
9PKD|1|S2|U|169
9PKD|1|S2|A|170
9PKD|1|S2|A|171
9PKD|1|S2|OMU|172
9PKD|1|S2|A|173
9PKD|1|S2|OMC|174
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: