IL_9PN5_018
3D structure
- PDB id
- 9PN5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Composite map of hypomethylated 80S ribosome treated with hygromycin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.75 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9PN5|1|A1|A|519, 9PN5|1|A1|U|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_40132.1
- Basepair signature
- cWW-tSH-tHS-tWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
9PN5|1|A1|G|517
9PN5|1|A1|G|518
9PN5|1|A1|A|519
9PN5|1|A1|U|520
9PN5|1|A1|A|521
9PN5|1|A1|A|522
9PN5|1|A1|A|523
9PN5|1|A1|U|524
9PN5|1|A1|C|525
*
9PN5|1|A1|G|567
9PN5|1|A1|G|568
9PN5|1|A1|A|569
9PN5|1|A1|A|570
9PN5|1|A1|U|571
9PN5|1|A1|A|572
9PN5|1|A1|C|573
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AC
- 60S ribosomal protein L4-A
- Chain AF
- 60S ribosomal protein L7-A
- Chain AM
- 60S ribosomal protein L14-A
- Chain AS
- Large ribosomal subunit protein eL20A
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