3D structure

PDB id
9PR4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
9PR4|1|A|C|2393, 9PR4|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PR4|1|A|A|2384
9PR4|1|A|U|2385
9PR4|1|A|C|2386
9PR4|1|A|U|2387
9PR4|1|A|A|2388
9PR4|1|A|C|2389
9PR4|1|A|A|2390
9PR4|1|A|A|2391
9PR4|1|A|U|2392
9PR4|1|A|C|2393
9PR4|1|A|A|2394
9PR4|1|A|A|2395
9PR4|1|A|C|2396
9PR4|1|A|C|2397
9PR4|1|A|A|2398
9PR4|1|A|A|2399
9PR4|1|A|C|2400
*
9PR4|1|A|G|2403
9PR4|1|A|U|2404
9PR4|1|A|C|2405
9PR4|1|A|A|2406
9PR4|1|A|U|2407
9PR4|1|A|U|2408

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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