IL_9PR4_043

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UACCUAACAAA*UCCUAAACUA

Length

21 nucleotides

Bulged bases

9PR4|1|A|C|2762, 9PR4|1|A|U|2763, 9PR4|1|A|A|2764, 9PR4|1|A|A|2767, 9PR4|1|A|C|2780, 9PR4|1|A|U|2781, 9PR4|1|A|A|2782

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PR4|1|A|U|2759
9PR4|1|A|A|2760
9PR4|1|A|C|2761
9PR4|1|A|C|2762
9PR4|1|A|U|2763
9PR4|1|A|A|2764
9PR4|1|A|A|2765
9PR4|1|A|C|2766
9PR4|1|A|A|2767
9PR4|1|A|A|2768
9PR4|1|A|A|2769
*
9PR4|1|A|U|2778
9PR4|1|A|C|2779
9PR4|1|A|C|2780
9PR4|1|A|U|2781
9PR4|1|A|A|2782
9PR4|1|A|A|2783
9PR4|1|A|A|2784
9PR4|1|A|C|2785
9PR4|1|A|U|2786
9PR4|1|A|A|2787

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial

Chain z

Large ribosomal subunit protein uL1m