IL_9PRA_058
3D structure
- PDB id
- 9PRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- CCCUGUAC*GGACAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRA_058 not in the Motif Atlas
- Geometric match to IL_9AXU_109
- Geometric discrepancy: 0.15
- The information below is about IL_9AXU_109
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9PRA|1|A|C|3119
9PRA|1|A|C|3120
9PRA|1|A|C|3121
9PRA|1|A|U|3122
9PRA|1|A|G|3123
9PRA|1|A|U|3124
9PRA|1|A|A|3125
9PRA|1|A|C|3126
*
9PRA|1|A|G|3131
9PRA|1|A|G|3132
9PRA|1|A|A|3133
9PRA|1|A|C|3134
9PRA|1|A|A|3135
9PRA|1|A|A|3136
9PRA|1|A|G|3137
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain Ad
- Mitochondrial assembly of ribosomal large subunit protein 1
- Chain Ag
- Elongation factor Tu, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
Coloring options: