IL_9PRQ_020
3D structure
- PDB id
- 9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- GUAG*CACC
- Length
- 8 nucleotides
- Bulged bases
- 9PRQ|1|A|A|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRQ_020 not in the Motif Atlas
- Homologous match to IL_1MMS_003
- Geometric discrepancy: 0.103
- The information below is about IL_1MMS_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28482.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9PRQ|1|A|G|2170
9PRQ|1|A|U|2171
9PRQ|1|A|A|2172
9PRQ|1|A|G|2173
*
9PRQ|1|A|C|2187
9PRQ|1|A|A|2188
9PRQ|1|A|C|2189
9PRQ|1|A|C|2190
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: