IL_9PRQ_073
3D structure
- PDB id
- 9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- UUU*AA
- Length
- 5 nucleotides
- Bulged bases
- 9PRQ|1|AA|U|831
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PRQ_073 not in the Motif Atlas
- Homologous match to IL_6CZR_126
- Geometric discrepancy: 0.3356
- The information below is about IL_6CZR_126
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
9PRQ|1|AA|U|830
9PRQ|1|AA|U|831
9PRQ|1|AA|U|832
*
9PRQ|1|AA|A|855
9PRQ|1|AA|A|856
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
- Chain Ag
- Elongation factor Tu, mitochondrial
- Chain Ah
- Transfer RNA; tRNA
Coloring options: