IL_9PSM_110

3D structure

PDB id

9PSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

AUA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9PSM_110 not in the Motif Atlas

Geometric match to IL_4V9F_047

Geometric discrepancy: 0.179

The information below is about IL_4V9F_047

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

9PSM|1|Aw|A|5
9PSM|1|Aw|U|6
9PSM|1|Aw|A|7
*
9PSM|1|Aw|U|66
9PSM|1|Aw|U|67
9PSM|1|Aw|U|68

Current chains

Chain Aw

A/P-tRNA

Nearby chains