IL_9Q1Q_195
3D structure
- PDB id
- 9Q1Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES (A site) in complex with Rabbit 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9Q1Q|1|9|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q1Q|1|9|G|145
9Q1Q|1|9|G|146
9Q1Q|1|9|A|147
9Q1Q|1|9|U|148
9Q1Q|1|9|A|149
9Q1Q|1|9|A|150
9Q1Q|1|9|C|151
*
9Q1Q|1|9|G|167
9Q1Q|1|9|C|168
9Q1Q|1|9|U|169
9Q1Q|1|9|A|170
9Q1Q|1|9|A|171
9Q1Q|1|9|U|172
9Q1Q|1|9|A|173
9Q1Q|1|9|C|174
Current chains
- Chain 9
- 18S RNA (1696-MER)
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain W
- uL24
- Chain YY
- 40S ribosomal protein S24
Coloring options: