IL_9Q1S_143
3D structure
- PDB id
- 9Q1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES (P site) in complex with Rabbit 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q1S|1|5|C|4596
9Q1S|1|5|U|4597
9Q1S|1|5|C|4598
9Q1S|1|5|A|4599
9Q1S|1|5|G|4600
9Q1S|1|5|U|4601
9Q1S|1|5|A|4602
9Q1S|1|5|C|4603
*
9Q1S|1|5|G|4608
9Q1S|1|5|G|4609
9Q1S|1|5|A|4610
9Q1S|1|5|A|4611
9Q1S|1|5|C|4612
9Q1S|1|5|C|4613
9Q1S|1|5|G|4614
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain H
- 60S ribosomal protein L9
- Chain V
- Large ribosomal subunit protein uL14
- Chain m
- Large ribosomal subunit protein eL40
Coloring options: