IL_9Q2M_008
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAAU*ACAUGUG
- Length
- 12 nucleotides
- Bulged bases
- 9Q2M|1|5|G|119, 9Q2M|1|5|U|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|5|C|118
9Q2M|1|5|G|119
9Q2M|1|5|A|120
9Q2M|1|5|A|121
9Q2M|1|5|U|122
*
9Q2M|1|5|A|147
9Q2M|1|5|C|148
9Q2M|1|5|A|149
9Q2M|1|5|U|150
9Q2M|1|5|G|151
9Q2M|1|5|U|152
9Q2M|1|5|G|153
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- Large ribosomal subunit protein eL8
- Chain N
- 60S ribosomal protein L15
- Chain h
- 60S ribosomal protein L35
Coloring options: