IL_9Q2M_116

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCAAAGU*AAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|5|U|3715
9Q2M|1|5|C|3716
9Q2M|1|5|A|3717
9Q2M|1|5|A|3718
9Q2M|1|5|A|3719
9Q2M|1|5|G|3720
9Q2M|1|5|U|3721
*
9Q2M|1|5|A|3732
9Q2M|1|5|A|3733
9Q2M|1|5|U|3734
9Q2M|1|5|G|3735
9Q2M|1|5|A|3736
9Q2M|1|5|A|3737
9Q2M|1|5|G|3738

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain ET

Transfer RNA; tRNA

Chain i

60S ribosomal protein L36

Chain o

eL42