IL_9Q2M_192

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9Q2M|1|9|U|285, 9Q2M|1|9|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|U|283
9Q2M|1|9|A|284
9Q2M|1|9|U|285
9Q2M|1|9|C|286
9Q2M|1|9|A|287
9Q2M|1|9|A|288
*
9Q2M|1|9|U|320
9Q2M|1|9|G|321
9Q2M|1|9|A|322
9Q2M|1|9|C|323
9Q2M|1|9|C|324
9Q2M|1|9|A|325
9Q2M|1|9|C|326
9Q2M|1|9|G|327

Current chains

Chain 9

18S rRNA

Nearby chains

Chain II

40S ribosomal protein S8

Chain LL

Small ribosomal subunit protein uS17

Chain XX

40S ribosomal protein S23